Systems Theory and Automatic Control

Recent Publications

Publications since 2010 only (full list of publications)

Journal articles and book chapters

[28]J. Matschek, E. Bullinger, F. von Haeseler, M. Skalej, and R. Findeisen. Mathematical 3D modelling and sensitivity analysis of multipolar radiofrequency ablation in the spine. Mathematical Biosciences, 284:51–60, 2017. (DOI)
[27]S. Koulchitsky, C. Delairesse, T. Beeken, A. Monteforte, J. Dethier, E. Quertemont, R. Findeisen, E. Bullinger, and V. Seutin. Activation of D2 autoreceptors alters cocaine-induced locomotion and slows down local field oscillations in the rat ventral tegmental area. Neuropharmacology, 108:120–127, 2016. (DOI)
[26]M. Schliemann-Bullinger, D. Fey, T. Bastogne, R. Findeisen, P. Scheurich, and E. Bullinger. The experimental side of parameter estimation. In L. Geris and D. Gomez-Cabrero, editors, Uncertainty in Biology, volume 17 of Studies in Mechanobiology, Tissue Engineering and Biomaterials. Springer, 1 edition, 2016. (DOI)
[25]J.-B. Tylcz, T. Bastogne, H. Benachour, D. Bechet, E. Bullinger, H. Garnier, and M. Barberi-Heyob. A model-based pharmacokinetics characterization method of engineered nanoparticles for pilot studies. IEEE Transactions on NanoBioscience, 14:368–377, 6/2015. (DOI)
[24]S. Blacher, C. Erpicum, B. Lenoir, J. Paupert, G. Moraes, S. Ormenese, E. Bullinger, and A. Noël. Cell invasion in the spheroid sprouting assay: A spatial organisation analysis adaptable to cell behaviour. PLoS ONE, 9(5):e97019, 05/2014. (DOI)
[23]M. C. Readman, M. Schliemann, D. Kalamatianos, and E. Bullinger. A feedback control perspective on models of apoptosis signal transduction. Chaos, Solitons & Fractals, 50:93–99, 2013. Special Issue ‘Functionality and Dynamics in Biological Systems’. (DOI)
[22]L. Trotta, E. Bullinger, and R. Sepulchre. Global analysis of dynamical decision-making models through local computation around the hidden saddle. PLoS One, 7(3):e33110, 2012. (DOI) (PMID:22438893)
[21]D. Fey, S. Commins, and E. Bullinger. Feedback control strategies for spatial navigation revealed by dynamic modelling of learning in the Morris water maze. J Comput Neurosci, 30(2):447–454, 2011. (DOI) (PMID:20799059)
[20]M. Schliemann, E. Bullinger, S. Borchers, F. Allgöwer, R. Findeisen, and P. Scheurich. Heterogeneity reduces sensitivity of cell death for TNF-stimuli. BMC Syst Biol, 5:204, 2011. (DOI) (PMID:22204418)

Articles in Conference Proceedings

[43]C. Kallies, M. Schliemann-Bullinger, R. Findeisen, S. Lucia, and E. Bullinger. Monotonicity of kinetic proofreading. In IFAC-PapersOnLine — Proc. of the 6th Foundations of Systems Biology in Engineering FOSBE 2016, 9–12 October, Magdeburg, Germany, 49:306–311, 2016.
[42]S. Lucia, M. Schliemann-Bullinger, R. Findeisen, and E. Bullinger. A set-based optimal control approach for pharmacokinetic / pharmacodynamic drug dosage design. In IFAC-PapersOnLine — 11th IFAC Symposium on Dynamics and Control of Process Systems, including Biosystems (DYCOPS-CAB 2016), 49:797–802, Trondheim, Norway, 6-8/6/2016. (DOI)
[41]J. Matschek, A. Himmel, F. von Haeseler, E. Bullinger, M. Skalej, and R. Findeisen. Mathematical modelling and sensitivity analysis of multipolar radiofrequency ablation in the spine. In IFAC-PapersOnLine — Proc. 9th IFAC Symposium on Biological and Medical Systems (BMS 2015), 48(20), Berlin, Germany, 31/8-2/9/2015. (DOI)
[40]B. Morabito, M. Kögel, E. Bullinger, G. Pannocchia, and R. Findeisen. Simple and efficient moving horizon estimation based on the fast gradient method. In IFAC-PapersOnLine — Proc. 5th IFAC Conference on Nonlinear Model Predictive Control (NMPC'15), 48(23), Seville, Spain, 17-20/9/2015. (DOI)
[39]M. Schliemann-Bullinger, M. C. Readman, D. Kalamatianos, R. Findeisen, and E. Bullinger. Unraveling apoptosis signalling using linear control methods: Linking the loop gain to reverting the decision to undergo apoptosis. In IFAC-PapersOnLine — Proc. IFAC Symposium on Advanced Control of Chemical Processes (ADCHEM 2015), 48(8), Whistler, BC, Canada, 07/6-10/06/2015. (DOI)
[38]S. Koulchitsky, T. Beeken, A. Monteforte, J. Dethier, E. Quertemont, R. Findeisen, E. Bullinger, and V. Seutin. Changed state changed brain shift of the dominant frequency of theta oscillations in the rat VTA during stereotypic locomotion. In Front. Hum. Neurosci., Ghent, Belgium, 10Q2014. Conference Abstract: Belgian Brain Council 2014 ‘Modulating the Brain: Facts, Fiction, Future’. (DOI)
[37]M. Schliemann, S. Livingstone, M. C. Readman, D. Kalamatianos, and E. Bullinger. Quantifying heterogeneity of cell death. In Proc. of the 12th IFAC Symposium on Computer Applications in Biotechnology, pages 181–186, Mumbai, India, 16-18/12/2013. (DOI)
[36]L. Trotta, E. Bullinger, and R. J. Sepulchre. Delayed-decision making in noisy bistable switches. In Proc. of the 12th IFAC Symposium on Computer Applications in Biotechnology, pages 84–88, Mumbai, India, 16-18/12/2013. (DOI)
[35]M. Schliemann, R. Findeisen, and E. Bullinger. Robustness-based model validation of an apoptosis signalling network model. In 16th IFAC Symposium on System Identification, pages 930–935, Brussels, Belgium, 11-13/07/2012. (DOI)
[34]D. Fey and E. Bullinger. Limiting the parameter search space for dynamic models with rational kinetics using semi-definite programming. In Proc. of the 11th IFAC Symposium on Computer Applications in Biotechnology, pages 150–155, Leuven, Belgium, 07-09/07/2010. (DOI)
[33]L. Trotta, R. Sepulchre, and E. Bullinger. Delayed decision-making in bistable models. In Proc. of the 49th IEEE Conf. on Decision and Control, Atlanta, GA, USA, pages 816–821, 2010. (DOI)

Poster Presentations and Internal Reports

[20]S. Koulchitsky, J. Dethier, E. Bullinger, R. Sepulchre, and V. M. Seutin. Single-cell activity and local field potentials in the ventral tegmental area of awake, freely moving rats. In Neuroscience 2012, 13-17/10/2012.
[19]M. Schliemann, R. Findeisen, P. Scheurich, and E. Bullinger. Dose-response characterization of tumour necrosis factor induced pro- and anti-apoptotic signalling pathways: From experiment to mathematical modelling for optimizing and designing quantitative therapeutic strategies. In Biomedica 2012, The European Life Sciences Summit, 18-19/04/2012.

Reviews

[4]M. Schliemann and E. Bullinger. Review of ‘A New Look at Disease: Parkinson's as seen through the eyes of an engineer’ by Peter Wellstead, Control System Principles, Stockport, United Kingdom, 2012, ISBN 978-0957386402. IEEE Control Systems Magazine, 34(1):70–71, 2014. (DOI)
[3]E. Bullinger and M. Schliemann. Review of ‘Computational Systems Biology of Cancer’ by Emmanuel Barillot, Laurence Calzone, Philippe Hupé, Jean-Philippe Vert and Andrei Zinovyev, Chapman & Hall/CRC, 2012. BioMedical Engineering OnLine, 12(1):76, 2013. (DOI)
[2]E. Bullinger and M. Schliemann. Review of three recent books on the boundary of bioinformatics and systems biology. BioMedical Engineering OnLine, 9(1):33, 2010. (DOI)

Editorials

[2]H. Yue and E. Bullinger. Editorial on special issue on ‘Robustness in Systems Biology: Methods and Applications’. International Journal on Robust and Nonlinear Control, 20:961–1078, 2010. (DOI)